Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015923556.1_cds_XP_016472147.1_64412
CDS Infomation

[gene=LOC107794188] [db_xref=GeneID:107794188] [protein=auxin response factor 18-like] [protein_id=XP_016472147.1] [location=complement(join(4800..4881,5052..5114,5269..6146,7000..8067))] [gbkey=CDS]
Sequence

ATGAAGGAGGTTATGGAGAAATGTGTGGACTCGCAGCTATGGCACGCTTGTGCCGGAGGA
ATGGTGCAAATCCCTCCGGTCAACTCCAAGGTCTACTATTTTCCACAAGGGCATGCTGAG
CATACTCTTGTAAATGTGGATTTCTCGACGCTACCGAGAACTCCTGCTCTGATTCTCTGT
AGGGTAGCTGCTGTGAAGTTCTTAGCGGACCCTGAAACGGACGAGGTTTATGCTAGGATT
AGGCTTGTCCCGGTTGGGAACAAGGGGAATGACTTTGATGATGATAACATTTTGGGGGGT
AGTAATGAGACAGGAACAAATGACAAGCCTACTTCATTTGCCAAGACATTGACTCAATCG
GATGCGAATAATGGGGGTGGATTCTCAGTGCCTAGGTACTGTGCAGAGACTATATTTCCT
AGGTTGGATTACACCGCTGACCCGCCTGTGCAGACTGTGATTGCCAAAGATGTTCATGGT
GAAACTTGGAAGTTTAGGCACATTTATAGAGGGACTCCGAGGAGGCATTTGTTAACAACT
GGTTGGAGTAATTTTGTGAATCAGAAGAAGCTGGTTGCAGGGGATTCCATTGTGTTTTTG
AGGGCAGAAAATGGTGAACTTTGTGTGGGAATTCGTAGGGCAAAAAGGGGTGGTATTGGT
GGGCCAGAAACCCCATCTGGATGGAACTCTGCTTCTGGAAACTATAGTGGATTTTCTGCG
TTTTTTAGGGAAGACATGAACAAGAACGGAAGCCTTAATTCTTCTGGGGGGAGCTTCAAG
GGAAAGGGAAGGGTGAGGCCTGAATCAGTTATTGAAGCTGCATATCTTGCTCCTAGTGGG
CAGCCTTTTGAAGTTGTATATTATCCCCGTGCAAGCACTCCAGAATTTTGTGTTAGGGCG
TCTTCCGTGAATACTGCCGTGAGGATTCACTGGTGCTCAGGGATGAGGTTTAAAATGGCT
TTTGAAACTGAGGTTTCTTCTCGAATCAGCTGGTTCATGGGAACTATATCCTCCATTCAA
GTTGCTGATCCCATCCACTGGCCCAATTCACCTTGGCGGCTTCTTCAGGTGACATGGGAT
GAACCTGATTTACTGCAAAATGTAAAACATGTCAGCCCATGGCTTGTCGAACTGGTCTCA
AATATGCCAGTCATTCACCTCTCGCCCTTCTCACCACCAAGAAAAAAGTTGCGTCTACCA
CCAGATTTCTTACTTGACGGCCAATTTCCGTTACCATCTTTTTCAGGCAACCCCCTCAGG
TCCAGCAGTCCTTTTTGTTGTCTATCTGACAACATCACTGCAGGCATACAGAGAGCCAGG
CATGCTCAATTTGGAGTACCTTTATTGGATCTGCACCTTAGCAACAAAGTGCAATCGGGA
CTCCTACCACCCAGTTTCCAGCGAGTTGCAGCTAACTCCAAACTTACTAATTGCATCAAT
AAGGGCCAAAATGACAGAAATGACAACATATCTTGCTTGCTTACCATGAGTACTTCTAGT
CAGATGTCGGAGAAAACTGATAGTGTGAATACACCTCGATTCTTACTCTTTGGTCAGCCA
ATTCTGACTGAGCAGCAAATTTCTAATCGTTGCTCTGCCAATGCTCAAGAAGTCCAAACA
GGAAGGGACTTAGGCAGGATAGAAATGAGAAATGAAAGATTTGCTTTTGAGCAGAAAGGT
CTTCAGGACAGTGTATCAAGTGCTACATATCTTTGGAATCGAGGTCATCATGCAGCTGGA
CTTGGTGCTGATACTGGTCAGTGCAAAGTATTCCTTGAGTCAGAGGATGTAGGCCTTTCA
CTTGATCTGTCAGTTCTGGGATCATATGAAGAACTGTACAGAAGACTTGGAAACTTGTTT
GGACTAGAAAGATCAGATATGCTGACATGTGTGCTCTATCACAATGCAACAGGTGCTGTT
AAACACACTGGAGAAGAACCATTCAGCGACTTCGTTAAGACTGCTAAAAGATTGACAATT
CTGATGAACCCAAGCAGCAACATTGAAAGGAAATGGATCACTGGTCTCGCAACTGCTGAA
CGTGGTCTAGATTCTTCAAACCGAGCAGGACCACTTAGCATCTTTGCATAG

Peptide Sequence

PEP ID

XP_016472147.1
PEP Infomation

PREDICTED: auxin response factor 18-like [Nicotiana tabacum]
Sequence

MKEVMEKCVDSQLWHACAGGMVQIPPVNSKVYYFPQGHAEHTLVNVDFSTLPRTPALILC
RVAAVKFLADPETDEVYARIRLVPVGNKGNDFDDDNILGGSNETGTNDKPTSFAKTLTQS
DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVIAKDVHGETWKFRHIYRGTPRRHLLTT
GWSNFVNQKKLVAGDSIVFLRAENGELCVGIRRAKRGGIGGPETPSGWNSASGNYSGFSA
FFREDMNKNGSLNSSGGSFKGKGRVRPESVIEAAYLAPSGQPFEVVYYPRASTPEFCVRA
SSVNTAVRIHWCSGMRFKMAFETEVSSRISWFMGTISSIQVADPIHWPNSPWRLLQVTWD
EPDLLQNVKHVSPWLVELVSNMPVIHLSPFSPPRKKLRLPPDFLLDGQFPLPSFSGNPLR
SSSPFCCLSDNITAGIQRARHAQFGVPLLDLHLSNKVQSGLLPPSFQRVAANSKLTNCIN
KGQNDRNDNISCLLTMSTSSQMSEKTDSVNTPRFLLFGQPILTEQQISNRCSANAQEVQT
GRDLGRIEMRNERFAFEQKGLQDSVSSATYLWNRGHHAAGLGADTGQCKVFLESEDVGLS
LDLSVLGSYEELYRRLGNLFGLERSDMLTCVLYHNATGAVKHTGEEPFSDFVKTAKRLTI
LMNPSSNIERKWITGLATAERGLDSSNRAGPLSIFA

Transcript Sequence

Gene sequence data has not been registered.